Locus OPMD PABPN1

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Disease

Name Oculopharyngeal muscular dystrophy
Description
OPMD is a late-onset neuromuscular disease, characterized by ptosis, dysphagia, and general facial weakness,, . Proximal limb weakness commonly develops later in the disease course .
Prevalence
1 100,000
1/100,000 (population specific) . Frequency of (GCN)11 alleles is 1-2% of North America/Europe/Japan . Disease is significantly enriched in individuals of Jewish Bukharian descent . Disease is found worldwide, in more than 30 countries .
Age of Onset Age of Onset(Typical)Years20  7940  59
Typical: 40-59 ; Range: 20-79 .
HPO Terms
Association
Mendelian

Locus

Details
Disease is caused by a GCN polyalanine expansion in the first exon of PABPN1. Most known patients have (GCG)+, but GCN (any polyalanine) may be pathogenic . This locus is heterozygous in ~90% of cases (autosomal dominant inheritance), while expansions are biallelic in ~10% of cases (consistent with autosomal recessive inheritance). Disease is generally more severe in cases with two expanded alleles. Age of onset is inverse to allele size, while penetrance and severity increase with allele size . Mild, late-onset disease can occur in individuals with a (GCN)10(GCN)11 genotype, suggesting variable penetrance . The definition of this locus differs in the literature with prior work counting exact GCG motifs for a benign size of (GCG)6 , while later resources count GCNs (any alanine codon), widening the region by 4 motifs to a benign size of (GCN)10, . STRchive is using the GCN definition.
Mechanism
GoF/LoF
Polyalanine expansions leading to cellular toxicity (loss of function) as well as abnormal aggregation and inefficient protein degradation, which may impact mRNA processing .
Detection
Flanking PCR with fragment analysis has accurately detected expansions [@pmid:27980005]. Heterozygous expansions have been sized by Sanger sequencing. Biallelic expanded variants were assessed using short-read sequencing or PCR fragment analysis.
Year
1998
Location in Gene
Coding Exon 1
Gene Strand

Alleles

Ref. Motif
GCN
Ranges BenignIntermediatePathogenicUnits10  1011  1112  18
Benign (ref.)
Benign (gene)
Pathogenic (ref.)
GCN
Pathogenic (gene)
CNG
Unknown (ref.)
Unknown (gene)
Interruption (ref.)
Interruption (gene)

gnomAD

Pathogenic genotype frequency data is not displayed for this locus because a substantial number of large alleles failed manual review by the gnomAD team.

References

Direct supporting references for info on this page.

2
Repeat expansion disorders.
Zhongbo,Chen, Huw R,Morris, James,Polke, Nicholas W,Wood, Sonia,Gandhi, Mina,Ryten, Henry,Houlden, Arianna,Tucci
Practical neurology · 2025-05-15
pmid:39349043
3
Neurological disorders caused by novel non-coding repeat expansions: clinical features and differential diagnosis.
Elisa,Vegezzi, Hiroyuki,Ishiura, D Cristopher,Bragg, David,Pellerin, Francesca,Magrinelli, Riccardo,Currò, Stefano,Facchini, Arianna,Tucci, John,Hardy, Nutan,Sharma, Matt C,Danzi, Stephan,Zuchner, Bernard,Brais, Mary M,Reilly, Shoji,Tsuji, Henry,Houlden, Andrea,Cortese
The Lancet. Neurology · 2024-07-01
pmid:38876750
4
The genetic and clinical characteristics of oculopharyngeal muscular dystrophy patients in Israel.
Merav,Ben-David, Lior,Greenbaum, Vera,Nikitn, Alex,Zvulunov, Hagit,Charas, Naama,Divon, Tali,Barkan, Odelia,Chorin, Haike,Reznik-Wolf, Ofira,Zloto, Limor,Benyamini, Shahar,Shelly, Amir,Dori
Orphanet journal of rare diseases · 2026-05-19
pmid:42157275
5
Profiling of Short-Tandem-Repeat Disease Alleles in 12,632 Human Whole Genomes.
Haibao,Tang, Ewen F,Kirkness, Christoph,Lippert, William H,Biggs, Martin,Fabani, Ernesto,Guzman, Smriti,Ramakrishnan, Victor,Lavrenko, Boyko,Kakaradov, Claire,Hou, Barry,Hicks, David,Heckerman, Franz J,Och, C Thomas,Caskey, J Craig,Venter, Amalio,Telenti
American journal of human genetics · 2017-11-02
pmid:29100084
6
Oculopharyngeal Muscular Dystrophy
Capucine,Trollet, Alexis,Boulinguiez, Fanny,Roth, Tanya,Stojkovic, Gillian,Butler-Browne, Teresinha,Evangelista, Jean,Lacau St Guily, Pascale,Richard
GeneReviews® · 1993-01-01
genereviews:NBK1126
7
Choked: A Case Report of Oculopharyngeal Muscular Dystrophy Mimicking Hypothyroidism From the Philippines.
Jerome M,Infante, Belinda Lioba,Nepomuceno
Cureus · 2023-06-27
pmid:37519616
8
Clinical and genetic features of a large homogeneous cohort of oculopharyngeal muscular dystrophy patients from the Canary Islands.
Jorge,Alonso-Pérez, Juan Carlos,de León Hernández, Helena,Pérez-Pérez, María Dolores,Mendoza-Grimón, Antonio José,Gutierrez-Martinez, Ioanna,Hadjigeorgiou, Fernando,Montón-Álvarez, Lidia,González-Quereda, Alicia,Alonso-Jimenez, Xavier,Suárez-Calvet, Jordi,Díaz-Manera
European journal of neurology · 2022-02-03
pmid:35112761
9
Correlation between PABPN1 genotype and disease severity in oculopharyngeal muscular dystrophy.
Pascale,Richard, Capucine,Trollet, Tanya,Stojkovic, Alix,de Becdelievre, Sophie,Perie, Jean,Pouget, Bruno,Eymard
Neurology · 2016-12-23
pmid:28011929
10
Short GCG expansions in the PABP2 gene cause oculopharyngeal muscular dystrophy.
B,Brais, J P,Bouchard, Y G,Xie, D L,Rochefort, N,Chrétien, F M,Tomé, R G,Lafrenière, J M,Rommens, E,Uyama, O,Nohira, S,Blumen, A D,Korczyn, P,Heutink, J,Mathieu, A,Duranceau, F,Codère, M,Fardeau, G A,Rouleau
Nature genetics · 1998-02-01
pmid:9462747

Additional Literature

Additional literature related to this locus.

Raw PubMed search results
(All PubMed results returned by searching for this gene, tandem repeats, and disease, in medline format)

Computational Short Tandem Repeat Genotyping Reveals Clinically Relevant Expansions in a Large Turkish Neurodegeneration Disease Cohort.
Zakhiriddin,Khojakulov, Robin J,Palvadeau, Müge,Kovancılar-Koç, Irmak,Atay, Irmak,Şahbaz, Şeyma,Tekgül, Ayça,Şahin, Esmer Zeynep Duru,Badakal, Tuğçe,Gül-Demirkale, Vildan,Çiftçi, Elif,Bayraktar, Ceren,Tunca, Natalia,Smolina, Fulya,Akçimen, Ayşe Nazlı,Başak
International journal of molecular sciences · 2026-05-13
pmid:42196324
The genetic and clinical characteristics of oculopharyngeal muscular dystrophy patients in Israel.
Merav,Ben-David, Lior,Greenbaum, Vera,Nikitn, Alex,Zvulunov, Hagit,Charas, Naama,Divon, Tali,Barkan, Odelia,Chorin, Haike,Reznik-Wolf, Ofira,Zloto, Limor,Benyamini, Shahar,Shelly, Amir,Dori
Orphanet journal of rare diseases · 2026-05-19
pmid:42157275
Evaluation of Epidermal Growth Factor Receptor and Its Inducible Feedback Inhibitor Leucine Rich Repeats and Immunoglobulin Like Domains 1 as Prognostic Marker in Oral Cancer.
Deepika,Verma, S S,Chauhan, Joginder,Kumar, Mohit,Arora, Qulsum,Akhtar, Lokesh,Kadian, Prerna,Jain, Vivek,Nayyar, Ajoy,Roychaudhury, Deepika,Mishra, Alok,Thakar, Riyaz A,Mir
Molecular carcinogenesis · 2026-03-01
pmid:41764774
Recurrent Pneumonia in a Patient With Oculopharyngeal Muscular Dystrophy (OPMD) due to GCN Expansion in the
Claudia,Mañana Valdés, Miguel,Arias Guillén, Germán,Moris de la Tassa
Open respiratory archives · 2026-01-15
pmid:41676387
Oculopharyngeal muscular dystrophy (OPMD) associated alanine expansion impairs the function of the nuclear polyadenosine RNA binding protein PABPN1 as revealed by proximity labeling and comparative proteomics.
Allison T,Mezzell, Yu,Zhang, Alexandra M,Perez, Katherine E,Vest
PLoS genetics · 2026-01-26
pmid:41587185
Feasibility of long-read sequencing to identify molecular alterations in an Indonesian cohort of locally advanced to advanced nasopharyngeal cancer.
,Handoko, Marlinda,Adham, Lisnawati,Rachmadi, Demak Lumban,Tobing, ,Asmarinah, ,Fadilah, Wei,Dai, Anne Wing Mui,Lee, Soehartati A,Gondhowiardjo
Scientific reports · 2025-07-01
pmid:40594369
Polyalanine Expansion in PABPN1 Alters the Structure and Dynamics of Its Nuclear Aggregates in Differentiated Muscle Cells.
Sander D,Mallon, Erik,Bos, Vahid,Sheikhhassani, Milad,Shademan, Lenard M,Voortman, Alireza,Mashaghi, Thomas H,Sharp, Vered,Raz
FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025-06-30
pmid:40552959
ATXN2L primarily interacts with NUFIP2, the absence of ATXN2L results in NUFIP2 depletion, and the ATXN2-polyQ expansion triggers NUFIP2 accumulation.
Jana,Key, Luis-Enrique,Almaguer-Mederos, Arvind Reddy,Kandi, Nesli-Ece,Sen, Suzana,Gispert, Gabriele,Köpf, David,Meierhofer, Georg,Auburger
Neurobiology of disease · 2025-04-11
pmid:40220918
Different outcomes of endurance and resistance exercise in skeletal muscles of Oculopharyngeal muscular dystrophy.
Alexis,Boulinguiez, Jamila,Dhiab, Barbara,Crisol, Laura,Muraine, Ludovic,Gaut, Corentin,Rouxel, Justine,Flaire, Hadidja-Rose,Mouigni, Mégane,Lemaitre, Benoit,Giroux, Lucie,Audoux, Benjamin,SaintPierre, Arnaud,Ferry, Vincent,Mouly, Gillian,Butler-Browne, Elisa,Negroni, Alberto,Malerba, Capucine,Trollet
Journal of cachexia, sarcopenia and muscle · 2024-08-07
pmid:39113268