Curation SCA51 THAP11
10 + 3 = 13 / 18
Genetic evidence
Total: 10
Category | Type | Citation | Score | Details |
|---|---|---|---|---|
Singular Evidence | Probands | 4.5 | PMID 37148549: two unrelated Chinese SCA pedigrees with THAP11 CAG expansions, including a five-generation family and a second family. PMID 39651830: population-scale follow-up identified three UK Biobank individuals with neurological diagnoses and THAP11 expansions ≥ 45 repeats, including one hereditary ataxia case; curator review is needed because that ataxia case also carried a CACNA1A/SCA6 expansion. | |
Collective Evidence | Allele | 2 | PMID 39651830: THAP11 expansions ≥ 45 repeats were rare across Genomics England, UCL IoN, and UK Biobank datasets; expanded alleles in this study typically had 6 CAA interruptions and short 3′ uninterrupted CAG tracts (9-10 repeats), supporting population-level repeat-size/structure assessment rather than direct SCA-specific allele severity. | |
Collective Evidence | Computational | 2 | PMID 15368101: THAP11 is a polymorphic brain-expressed CAG/polyQ locus and folding simulations predicted increased unfolding/aggregation risk with longer polyQ tracts. PMID 37148549: predicted mutant THAP11 structures [(CAG)45/(CAG)100] showed altered polyQ/random-coil organization and potential protein-binding changes compared with shorter alleles. PMID 39651830: population-scale repeat-structure analysis showed ancestry-related differences in CAA interruptions and 3′ CAG tract architecture. | |
Collective Evidence | Segregation | 1.5 | PMID 37148549: THAP11 CAG expansions cosegregated with ataxic or preataxic status in family 1, and linkage analysis identified the 16q22.1 region containing THAP11 with maximum LOD score 3.994. |
Experimental evidence
Total: 3
Category | Type | Citation | Score | Details |
|---|---|---|---|---|
Function | Biochemical function | 0.5 | PMID 24677642: THAP11 is a transcription-associated nuclear protein; expanded THAP11(38Q) suppressed CRE-mediated transcriptional activity more strongly than THAP11(29Q) in PC12 cells. | |
Function | Protein interaction | 0.5 | PMID 24677642: co-immunoprecipitation in PC12 cells showed expanded THAP11(38Q), but not THAP11(29Q), recruited TBP, CBP, and HSP70; PCBP1 interacted with both forms. | |
Functional Alteration | Non-patient cells | 1 | Functional studies using PC12 cells, COS-7 cells, and neuronal/primary neuron cell models expressing THAP11 polyQ constructs. These experiments support THAP11 polyQ length-dependent aggregation, cellular toxicity, G0/G1 arrest, and altered transcription-related effects. | |
Functional Alteration | Non-patient cells | 1 | PMID 37148549: Neuro-2a cells expressing expanded THAP11-(CAG)54 or THAP11-(CAG)100 showed increased intracellular/cytoplasmic aggregation and reduced viability compared with THAP11-(CAG)29. |